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Table 4 TEST Error Analysis for the ShARe and OUD Data Set

From: Multi-task transfer learning for the prediction of entity modifiers in clinical text: application to opioid use disorder case detection

Error type

Example

Proportion

 

MODIFIER

ANNOTATION

MODEL

 

False negative (ShARe)

Ex1: His extremities also showed greater swelling in his left leg.

46%

COURSE

INCREASED

UNMARKED

Ex2: He had slight decreased sensation in his right upper extremity.

SEVERITY

SLIGHT

UNMARKED

Ex3: Peptic ulcer disease in the OMR, but the patient denies this.

NEGATION

YES

NO

False positive (ShARe)

Ex1: These findings are consistent with a hematoma which appears more organized than on prior exam.

54%

UNCERTAINTY

NO

YES

Ex2: Per her daughter she has been having shortness of breath.

SUBJECT

PATIENT

FAMILY MEMBER

Ex3: Family History: Father died 66 from heart failure Mother died 59 from cervical cancer. Diabetes in father’s family as well as heart disease.

SUBJECT

OTHER

FAMILY MEMBER

False negative (OUD)

Ex1: He was hospitalized in the CPM in 2011 for suicidal ideations for several days.

58%

DOCTIME

BEFORE

OVERLAP

Ex2: Family History: 0 suicide attempts.

NEGATION

YES

NO

Ex3: During interview she stated she has not been using illicit substances since D/C, but after UDS came back pos for amphetamines and benzos, she admitted to using these illicitly about a week ago due to her high anxiety.

IDU

TRUE

FALSE

False positive (OUD)

Ex1: He said he was snorting heroin and is not sure exactly how much he took.

42%

UNCERTAINTY

NO

YES

Ex2: How has addiction impacted your relationships?: Was dating my husband when I was using suboxone, hid it from him.

IDU

FALSE

TRUE

Ex3: Lab Results : U Methadone Negative U Opiates Positive U Oxycodone Negative.

NEGATION

NO

YES

  1. Mention in each example is underlined. Longer context is ignored for the space limit. False negatives in this context are when the default modifier class is predicted. False positives are when the wrong modifier class is predicted